Provided by: libbio-perl-perl_1.7.2-2_all bug


       Bio::Tools::FootPrinter - write sequence features in FootPrinter format


           use Bio::Tools::FootPrinter;

           my $tool = Bio::Tools::FootPrinter->new(-file=>"footprinter.out");

           while (my $result = $tool->next_feature){
             foreach my $feat($result->sub_SeqFeature){
               print $result->seq_id."\t".$feat->start."\t".$feat->end."\t".$feat->seq->seq."\n";


       This module writes sequence features in FootPrinter format.  See
       <> for more details.


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AUTHOR - Shawn Hoon



       The rest of the documentation details each of the object methods.  Internal methods are
       usually preceded with a _

        Title   : new
        Usage   : my $obj = Bio::Tools::FootPrinter->new();
        Function: Builds a new Bio::Tools::FootPrinter object
        Returns : Bio::Tools::FootPrinter
        Args    : -fh/-file => $val, # for initing input, see Bio::Root::IO

        Title   : next_feature
        Usage   : my $r = $footprint->next_feature
        Function: Get the next feature from parser data
        Returns : L<Bio::SeqFeature::Generic>
        Args    : none

        Title   : _add_feature
        Usage   : $footprint->_add_feature($feat)
        Function: Add feature to array
        Returns : none
        Args    : none

        Title   : _parse_predictions
        Usage   : my $r = $footprint->_parse_predictions
        Function: do the parsing
        Returns : none
        Args    : none

        Title   : _predictions_parsed
        Usage   : $footprint->_predictions_parsed(1)
        Function: Get/Set for whether predictions parsed
        Returns : 1/0
        Args    : none

        Title   : _parse
        Usage   : $footprint->_parse($name,$seq,$pattern)
        Function: do the actual parsing
        Returns : L<Bio::SeqFeature::Generic>
        Args    : none