Provided by: libbio-perl-perl_1.7.2-2_all bug


       Bio::Tools::Hmmpfam - Parser for Hmmpfam program


         use Bio::Tools::Hmmpfam;
         my @hmmpfam_feat;
         my $hmmpfam_parser = Bio::Tools::Hmmpfam->new(-fh =>$filehandle );
         while( my $hmmpfam_feat = $hmmpfam_parser->next_result ) {
               push @hmmpfam_feat, $hmmpfam_feat;


       Parser for Hmmpfam  program.  See also Bio::SearchIO::hmmer.


   Mailing Lists
        User feedback is an integral part of the evolution of this and other
        Bioperl modules. Send your comments and suggestions preferably to
        the Bioperl mailing list.  Your participation is much appreciated.
                  - General discussion  - About the mailing lists

       Please direct usage questions or support issues to the mailing list:

       rather than to the module maintainer directly. Many experienced and reponsive experts will
       be able look at the problem and quickly address it. Please include a thorough description
       of the problem with code and data examples if at all possible.

   Reporting Bugs
       Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their
       resolution. Bug reports can be submitted via the web:

AUTHOR - Balamurugan Kumarasamy



        The rest of the documentation details each of the object methods.
        Internal methods are usually preceded with a _

        Title   : new
        Usage   : my $obj = Bio::Tools::Hmmpfam->new(-fh=>$filehandle);
        Function: Builds a new Bio::Tools::Hmmpfam object
        Returns : Bio::Tools::Hmmpfam
        Args    : -filename
                  -fh (filehandle)

        Title   : next_result
        Usage   : my $feat = $hmmpfam_parser->next_result
        Function: Get the next result set from parser data
        Returns : L<Bio::SeqFeature::Generic>
        Args    : none

        Title   : create_feature
        Usage   : my $feat=$hmmpfam_parser->create_feature($feature,$seqname)
        Function: creates a SeqFeature Generic object
        Returns : L<Bio::SeqFeature::Generic>
        Args    :

        Title   :   seqname
        Usage   :   obj->seqname($seqname)
        Function:   Internal(not to be used directly)
        Returns :
        Args    :   seqname