Provided by: libbio-perl-perl_1.7.2-2_all bug


       Bio::Matrix::PSM::IO::psiblast - PSM psiblast parser


       See Bio::Matrix::PSM::IO for documentation


       Parser for ASCII matrices from PSI-BLAST (blastpgp program in BLAST distribution).


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AUTHOR - James Thompson



        Title   : new
        Usage   : my $psmIO  =  Bio::Matrix::PSM::IO->new(-format=>'psiblast',
        Function: Associates a file with the appropriate parser
        Throws  :
        Example :
        Args    :
        Returns : Bio::Matrix::PSM::ProtMatrix->new(@args);

        Title   : next_psm
        Usage   : my $psm = $psmIO->next_psm();
        Function: Reads the next PSM from the input file, associated with this object
        Throws  : None
        Returns : Bio::Matrix::PSM::ProtPsm object
        Args    : none