Provided by: cmtk_3.3.1-1.2build1_amd64
mk_nifti_hdr - Make NIFTI header file
mk_nifti_hdr [options] [output.nii]
Make header file according to NIFTI file format based on user-supplied parameters for geometry, data type, orientation, etc.
Global Toolkit Options (these are shared by all CMTK tools) --help Write list of basic command line options to standard output. --help-all Write complete list of basic and advanced command line options to standard output. --wiki Write list of command line options to standard output in MediaWiki markup. --man Write man page source in 'nroff' markup to standard output. --version Write toolkit version to standard output. --echo Write the current command line to standard output. --verbose-level <integer> Set verbosity level. --verbose, -v Increment verbosity level by 1 (deprecated; supported for backward compatibility). --threads <integer> Set maximum number of parallel threads (for POSIX threads and OpenMP). Main Options --dims <string>, -D <string> Set dimensions in voxels. Provided as 'DimsX,DimsY,DimsZ' --voxel <string>, -V <string> Set voxel size. Provided as 'PixX,PixY,PixZ' [in mm] --offset <float>, -O <float> Binary data file offset [Default: disabled] --byte, -b 8 bits, unsigned (this is the default) --char, -c 8 bits, signed --short, -s 16 bits, signed --ushort, -u 16 bits, unsigned --int, -i 32 bits signed --float, -f 32 bits floating point --double, -d 64 bits floating point --reset-coordinates In an imported header, reset the image-to-physical coordinate mapping to an identity matrix. --attached Create attached header for use in single-file images. Image data must be concatenated directly onto the created header file. --import <string>, -I <string> Import data from given header file. [Default: NONE] --description <string> Set description string [max. 80 characters] [Default: NONE]
Torsten Rohlfing, with contributions from Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, Daniel B. Russakoff, and Yaroslav Halchenko
Report bugs at http://nitrc.org/projects/cmtk/
CMTK is developed with support from the NIAAA under Grant AA021697, National Consortium on Alcohol and Neurodevelopment in Adolescence (N-CANDA): Data Integration Component. From April 2009 through September 2011, CMTK development and maintenance was supported by the NIBIB under Grant EB008381.