Provided by: bali-phy_3.3+dfsg-1_amd64

**NAME**

tree-mean-lengths– Compute the mean lengths for branches in the given topology.

**SYNOPSIS**

tree-mean-lengthstree-file< in-file

**DESCRIPTION**

Compute the mean lengths for branches in the given topology.

**ALLOWED** **OPTIONS:**

-h,–helpproduce help message–treeargtree to re-root-sarg(=0),–skiparg(=0)number of tree samples to skip-uarg,–untilargRead until this number of trees.–pruneargComma-separated taxa to remove-xarg(=1),–subsamplearg(=1)factor by which to subsample–varreport standard deviation of branch lengths instead of mean–no-node-lengthsignore branches not in the specified topology–safeDon't die if no trees match the topology–drop-partialRemove partial branches–seedargrandom seed-v,–verboseOutput more log messages on stderr.

**REPORTING** **BUGS:**

BAli-Phy online help: <http://www.bali-phy.org/docs.php>. Please send bug reports to <bali-phy-users@googlegroups.com>.

**AUTHORS**

Benjamin Redelings. Feb 2018 tree-mean-lengths(1)