Provided by: seer_1.1.4-2build1_amd64
R_mds - project distance matrix into lower number of dimensions
R_mds -k <filtered_kmers.txt> -p <pheno_file>
Projects distance matrix into lower number of dimensions Requires R and rhdf5 to be installed, see github wiki for more details
Required -d, --dist Distance matrix output by kmds -p, --pheno Phenotype file used by seer Optional -o, --output Output prefix (default 'all_structure') --pc Number of dimensions to project into (default 3) -R R executable (default 'which R') -h, --help Displays this message
This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.