Provided by: libgenome-model-tools-music-perl_0.04-4_all
gmt music bmr
gmt music bmr - Calculate gene coverages and background mutation rates.
This document describes gmt music bmr version 0.04 (2018-07-05 at 09:17:13)
gmt music bmr ...
These tools are part of the MuSiC suite.
GENERAL calc-bmr Calculates mutation rates given per-gene coverage (from "music bmr calc-covg"), and a mutation list calc-covg Uses calcRoiCovg.c to count covered bases per-gene for each given tumor-normal pair of BAMs. calc-covg-helper Uses calcRoiCovg.c to count covered bases per-gene for a tumor-normal pair of BAMs. calc-wig-covg Count covered bases per-gene for each given wiggle track format file.
Copyright (C) 2010-2011 Washington University in St. Louis. It is released under the Lesser GNU Public License (LGPL) version 3. See the associated LICENSE file in this distribution.
Cyriac Kandoth, Ph.D.
genome-music-bmr-calc-covg(1), genome-music-bmr-calc-bmr(1), genome-music(1), genome(1)