Provided by: probcons-extra_1.12-12_amd64
pc-compare - Program for scoring alignments according to a reference alignment with respect to sum-of-pairs and column scores.
pc-compare [TEST_ALIGNMENT] [REFERENCE_ALIGNMENT] [BALIBASE_ANNOT_FILE] [-col] [-core] [-caps] [-annot FILENAME]
pc-compare is named compare in the original sources, but has been remamed to avoid collision with other program names.
pc-makegnufile(1), pc-project(1),from the probcons-extra package, and probcons(1) and probcons-RNA(1) from the probcons package.
Please cite Do, C.B., Mahabhashyam, M.S.P., Brudno, M., and Batzoglou, S. 2005. PROBCONS: Probabilistic Consistency-based Multiple Sequence Alignment. Genome Research 15: 330-340.
Chuong Do <firstname.lastname@example.org> Wrote probcons in collaboration with Michael Brudno in the research group of Serafim Batzoglou, Department of Computer Science, Stanford University. Charles Plessy <email@example.com> Wrote this manpage in DocBook XML for the Debian distribution.
This program and its manpage are in the public domain.