Provided by: rdp-readseq_2.0.2-6_all
rdp-readseq: - Ribosomal Database Project (RDP) sequence reading and writing
rdp-readseq <subcommand> <subcommand args ...>
rdp-readseq is a simple user interface to the sequence reading library developed by the Ribosomal Database Project. It can handle genbank, embl, fasta, fastq, sff and sto files. It can read from files or streams, and can handle indexing files.
List of subcommands: random-sample - random select a subset or subregion of sequences reverse-comp - reverse complement sequences rm-dupseq - remove identical or substring of sequences select-seqs - select or deselect sequences from a file split - split sequences to-fasta - convert to fasta format to-fastq - convert to fastq format to-stk - convert to stk format