Provided by: prime-phylo_1.0.11-7_amd64
reconcile - This program outputs the reconciliation that minimizes the number of duplications
reconcile [OPTIONS] gene-tree species-tree [gene-species-map]
This program outputs the reconciliation that minimizes the number of duplications
--help Display help (this text). -V, --version Print version and exit -r, --reroot any|random|no Reroot the tree to minimize the number of implied duplications/losses if the most parsimonious reconciliation is chosen. Default is "no". -w --weights FLOAT FLOAT Determine the relative importance of duplications vs losses. First weight is for duplications and the second for losses. The default is 1.0,0.0 which counts duplications only. Weights are required to be positive.
0 Successful program execution. 1 Some error occurred
The prime-phylo home page: http://prime.sbc.su.se
primeDTLSR(1), primeDLRS(1), primeGEM(1), chainsaw(1), reconcile(1), reroot(1), tree2leafnames(1), treesize(1)