Provided by: samtools_1.9-4_amd64

**NAME**

wgsim - short read simulator

**SYNOPSIS**

wgsim[options]<in.ref.fa><out.read1.fq><out.read2.fq>

**OPTIONS**

-eFLOAT base error rate [0.020]-dINT outer distance between the two ends [500]-sINT standard deviation [50]-NINT number of read pairs [1000000]-1INT length of the first read [70]-2INT length of the second read [70]-rFLOAT rate of mutations [0.0010]-RFLOAT fraction of indels [0.15]-XFLOAT probability an indel is extended [0.30]-SINT seed for random generator [-1]-hhaplotype mode

**AUTHOR**

The software was written by Heng Li <lh3@sanger.ac.uk> This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.