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i.smap - Performs contextual image classification using sequential maximum a posteriori (SMAP) estimation.
imagery, classification, supervised classification, segmentation, SMAP
i.smap i.smap --help i.smap [-m] group=name subgroup=name signaturefile=name output=name [goodness=name] [blocksize=integer] [--overwrite] [--help] [--verbose] [--quiet] [--ui] Flags: -m Use maximum likelihood estimation (instead of smap) --overwrite Allow output files to overwrite existing files --help Print usage summary --verbose Verbose module output --quiet Quiet module output --ui Force launching GUI dialog Parameters: group=name [required] Name of input imagery group subgroup=name [required] Name of input imagery subgroup signaturefile=name [required] Name of input file containing signatures Generated by i.gensigset output=name [required] Name for output raster map holding classification results goodness=name Name for output raster map holding goodness of fit (lower is better) blocksize=integer Size of submatrix to process at one time Default: 1024
The i.smap program is used to segment multispectral images using a spectral class model known as a Gaussian mixture distribution. Since Gaussian mixture distributions include conventional multivariate Gaussian distributions, this program may also be used to segment multispectral images based on simple spectral mean and covariance parameters. i.smap has two modes of operation. The first mode is the sequential maximum a posteriori (SMAP) mode [1,2]. The SMAP segmentation algorithm attempts to improve segmentation accuracy by segmenting the image into regions rather than segmenting each pixel separately (see NOTES). The second mode is the more conventional maximum likelihood (ML) classification which classifies each pixel separately, but requires somewhat less computation. This mode is selected with the -m flag (see below).
Flags: -m Use maximum likelihood estimation (instead of smap). Normal operation is to use SMAP estimation (see NOTES). Parameters: group=name imagery group The imagery group that defines the image to be classified. subgroup=name imagery subgroup The subgroup within the group specified that specifies the subset of the band files that are to be used as image data to be classified. signaturefile=name imagery signaturefile The signature file that contains the spectral signatures (i.e., the statistics) for the classes to be identified in the image. This signature file is produced by the program i.gensigset (see NOTES). blocksize=value size of submatrix to process at one time default: 1024 This option specifies the size of the "window" to be used when reading the image data. This program was written to be nice about memory usage without influencing the resultant classification. This option allows the user to control how much memory is used. More memory may mean faster (or slower) operation depending on how much real memory your machine has and how much virtual memory the program uses. The size of the submatrix used in segmenting the image has a principle function of controlling memory usage; however, it also can have a subtle effect on the quality of the segmentation in the smap mode. The smoothing parameters for the smap segmentation are estimated separately for each submatrix. Therefore, if the image has regions with qualitatively different behavior, (e.g., natural woodlands and man-made agricultural fields) it may be useful to use a submatrix small enough so that different smoothing parameters may be used for each distinctive region of the image. The submatrix size has no effect on the performance of the ML segmentation method. output=name output raster map. The name of a raster map that will contain the classification results. This new raster map layer will contain categories that can be related to landcover categories on the ground.
If none of the arguments are specified on the command line, i.smap will interactively prompt for the names of the maps and files.
The SMAP algorithm exploits the fact that nearby pixels in an image are likely to have the same class. It works by segmenting the image at various scales or resolutions and using the coarse scale segmentations to guide the finer scale segmentations. In addition to reducing the number of misclassifications, the SMAP algorithm generally produces segmentations with larger connected regions of a fixed class which may be useful in some applications. The amount of smoothing that is performed in the segmentation is dependent of the behavior of the data in the image. If the data suggests that the nearby pixels often change class, then the algorithm will adaptively reduce the amount of smoothing. This ensures that excessively large regions are not formed. The degree of misclassifications can be investigated with the goodness of fit output map. Lower values indicate a better fit. The largest 5 to 15% of the goodness values may need some closer inspection. The module i.smap does not support MASKed or NULL cells. Therefore it might be necessary to create a copy of the classification results using e.g. r.mapcalc: r.mapcalc "MASKed_map = classification_results"
Supervised classification of LANDSAT g.region raster=lsat7_2002_10 -p # store VIZ, NIR, MIR into group/subgroup i.group group=my_lsat7_2002 subgroup=my_lsat7_2002 \ input=lsat7_2002_10,lsat7_2002_20,lsat7_2002_30,lsat7_2002_40,lsat7_2002_50,lsat7_2002_70 # Now digitize training areas "training" with the digitizer # and convert to raster model with v.to.rast v.to.rast input=training output=training use=cat label_column=label # calculate statistics i.gensigset trainingmap=training group=my_lsat7_2002 subgroup=my_lsat7_2002 \ signaturefile=my_smap_lsat7_2002 maxsig=5 i.smap group=my_lsat7_2002 subgroup=my_lsat7_2002 signaturefile=my_smap_lsat7_2002 \ output=lsat7_2002_smap_classes # Visually check result d.mon wx0 d.rast.leg lsat7_2002_smap_classes # Statistically check result r.kappa -w classification=lsat7_2002_smap_classes reference=training
· C. Bouman and M. Shapiro, "Multispectral Image Segmentation using a Multiscale Image Model", Proc. of IEEE Int’l Conf. on Acoust., Speech and Sig. Proc., pp. III-565 - III-568, San Francisco, California, March 23-26, 1992. · C. Bouman and M. Shapiro 1994, "A Multiscale Random Field Model for Bayesian Image Segmentation", IEEE Trans. on Image Processing., 3(2), 162-177" (PDF) · McCauley, J.D. and B.A. Engel 1995, "Comparison of Scene Segmentations: SMAP, ECHO and Maximum Likelyhood", IEEE Trans. on Geoscience and Remote Sensing, 33(6): 1313-1316.
i.group for creating groups and subgroups r.mapcalc to copy classification result in order to cut out MASKed subareas i.gensigset to generate the signature file required by this program g.gui.iclass, i.maxlik, i.smap, r.kappa
Charles Bouman, School of Electrical Engineering, Purdue University Michael Shapiro, U.S.Army Construction Engineering Research Laboratory Last changed: $Date: 2014-12-19 22:17:36 +0100 (Fri, 19 Dec 2014) $
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