Provided by: last-align_963-2_amd64
last-map-probs - Add extra column with mapping probabilities
last-map-probs [options] lastal-alignments
Calculate a mismap probability for each alignment. This is the probability that the alignment does not reflect the origin of the query sequence, assuming that one reported alignment does reflect the origin of each query.
-h, --help show this help message and exit -m M, --mismap=M don't write alignments with mismap probability > M (default: 0.01) -s S, --score=S don't write alignments with score < S (default: e+t*ln)