Provided by: libbio-perl-perl_1.7.2-3_all bug

NAME

       Bio::Factory::AnalysisI - An interface to analysis tool factory

SYNOPSIS

       This is an interface module - you do not instantiate it.  Use
       Bio::Tools::Run::AnalysisFactory module:

         use Bio::Tools::Run::AnalysisFactory;
         my $list = Bio::Tools::Run::AnalysisFactory->new->available_analyses;

DESCRIPTION

       This interface contains all public methods for showing available analyses and for creating
       objects representing them.

FEEDBACK

   Mailing Lists
       User feedback is an integral part of the evolution of this and other Bioperl modules. Send
       your comments and suggestions preferably to the Bioperl mailing list.  Your participation
       is much appreciated.

         bioperl-l@bioperl.org                  - General discussion
         http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

   Support
       Please direct usage questions or support issues to the mailing list:

       bioperl-l@bioperl.org

       rather than to the module maintainer directly. Many experienced and reponsive experts will
       be able look at the problem and quickly address it. Please include a thorough description
       of the problem with code and data examples if at all possible.

   Reporting Bugs
       Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their
       resolution. Bug reports can be submitted via the web:

         https://github.com/bioperl/bioperl-live/issues

AUTHOR

       Martin Senger (martin.senger@gmail.com)

COPYRIGHT

       Copyright (c) 2003, Martin Senger and EMBL-EBI.  All Rights Reserved.

       This module is free software; you can redistribute it and/or modify it under the same
       terms as Perl itself.

DISCLAIMER

       This software is provided "as is" without warranty of any kind.

SEE ALSO

       ยท   http://www.ebi.ac.uk/Tools/webservices/soaplab/guide

APPENDIX

       This is actually the main documentation...

       If you try to call any of these methods directly on this "Bio::Factory::AnalysisI" object
       you will get a not implemented error message. You need to call them on a
       "Bio::Tools::Run::AnalysisFactory" object instead.

   available_categories
        Usage   : $factory->available_categories;
        Returns : an array reference with the names of
                  available categories
        Args    : none

       The analysis tools may be grouped into categories by their functional similarity, or by
       the similar data types they deal with. This method shows all available such categories.

   available_analyses
        Usage   : $factory->available_analyses;
                  $factory->available_analyses ($category);
        Returns : an array reference with the names of
                  all available analyses, or the analyses
                  available in the given '$category'
        Args    : none || category_name

       Show available analyses. Their names usually consist of category analysis names, separated
       by "::".

   create_analysis
        Usage   : $factory->create_analysis ($name);
        Returns : a Bio::Tools::Run::Analyis object
        Args    : analysis name

       A real factory method creating an analysis object. The created object gets all access and
       location information from the factory object.