Provided by: libbio-perl-perl_1.7.2-3_all bug

NAME

       Bio::Search::Hit::Fasta - Hit object specific for Fasta-generated hits

SYNOPSIS

         # You wouldn't normally create these manually;
         # instead they would be produced by Bio::SearchIO::fasta

         use Bio::Search::Hit::Fasta;
         my $hit = Bio::Search::Hit::Fasta->new(id=>'LBL_6321', desc=>'lipoprotein', e_val=>0.01);

DESCRIPTION

       Bio::Search::Hit::HitI objects are data structures that contain information about specific
       hits obtained during a library search.  Some information will be algorithm-specific, but
       others will be generally defined, such as the ability to obtain alignment objects
       corresponding to each hit.

SEE ALSO

       Bio::Search::Hit::HitI, Bio::Search::Hit::GenericHit, Bio::SearchIO::fasta.

FEEDBACK

   Mailing Lists
       User feedback is an integral part of the evolution of this and other Bioperl modules. Send
       your comments and suggestions preferably
        to one of the Bioperl mailing lists.  Your participation is much appreciated.

         bioperl-l@bioperl.org                  - General discussion
         http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

   Support
       Please direct usage questions or support issues to the mailing list:

       bioperl-l@bioperl.org

       rather than to the module maintainer directly. Many experienced and reponsive experts will
       be able look at the problem and quickly address it. Please include a thorough description
       of the problem with code and data examples if at all possible.

   Reporting Bugs
       Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their
       resolution.  Bug reports can be submitted via the web:

         https://github.com/bioperl/bioperl-live/issues

AUTHOR - Aaron Mackey

       Email amackey-at-virginia.edu

APPENDIX

       The rest of the documentation details each of the object methods. Internal methods are
       usually preceded with a _

   _initialize
        Function: where the heavy stuff will happen when new is called

   AUTOLOAD
        Function: Provide getter/setters for ID,DESC,SIZE,INITN,INIT1,OPT,ZSC,E_VAL