Provided by: libbio-perl-perl_1.7.2-3_all bug

NAME

       Bio::Tools::RepeatMasker - a parser for RepeatMasker output

SYNOPSIS

           use Bio::Tools::RepeatMasker;
           my $parser = Bio::Tools::RepeatMasker->new(-file => 'seq.fa.out');
           while( my $result = $parser->next_result ) {
             # get some value
           }

DESCRIPTION

       A parser for RepeatMasker output

FEEDBACK

   Mailing Lists
       User feedback is an integral part of the evolution of this and other Bioperl modules. Send
       your comments and suggestions preferably to the Bioperl mailing list.  Your participation
       is much appreciated.

         bioperl-l@bioperl.org                  - General discussion
         http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

   Support
       Please direct usage questions or support issues to the mailing list:

       bioperl-l@bioperl.org

       rather than to the module maintainer directly. Many experienced and reponsive experts will
       be able look at the problem and quickly address it. Please include a thorough description
       of the problem with code and data examples if at all possible.

   Reporting Bugs
       Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their
       resolution. Bug reports can be submitted via the web:

         https://github.com/bioperl/bioperl-live/issues

AUTHOR - Shawn Hoon

       Email shawnh@fugu-sg.org

APPENDIX

       The rest of the documentation details each of the object methods.  Internal methods are
       usually preceded with a _

   new
        Title   : new
        Usage   : my $obj = Bio::Tools::RepeatMasker->new();
        Function: Builds a new Bio::Tools::RepeatMasker object
        Returns : Bio::Tools::RepeatMasker
        Args    : -fh/-file => $val, for initing input, see Bio::Root::IO

   next_result
        Title   : next_result
        Usage   : my $r = $rpt_masker->next_result
        Function: Get the next result set from parser data
        Returns : Bio::SeqFeature::FeaturePair
                  Feature1 is the Query coordinates and Feature2 is the Hit
        Args    : none