Provided by: libbio-perl-perl_1.7.2-3_all bug


       Bio::Tools::RepeatMasker - a parser for RepeatMasker output


           use Bio::Tools::RepeatMasker;
           my $parser = Bio::Tools::RepeatMasker->new(-file => 'seq.fa.out');
           while( my $result = $parser->next_result ) {
             # get some value


       A parser for RepeatMasker output


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AUTHOR - Shawn Hoon



       The rest of the documentation details each of the object methods.  Internal methods are
       usually preceded with a _

        Title   : new
        Usage   : my $obj = Bio::Tools::RepeatMasker->new();
        Function: Builds a new Bio::Tools::RepeatMasker object
        Returns : Bio::Tools::RepeatMasker
        Args    : -fh/-file => $val, for initing input, see Bio::Root::IO

        Title   : next_result
        Usage   : my $r = $rpt_masker->next_result
        Function: Get the next result set from parser data
        Returns : Bio::SeqFeature::FeaturePair
                  Feature1 is the Query coordinates and Feature2 is the Hit
        Args    : none