Provided by: cod-tools_2.10+dfsg-1_amd64
NAME
cif_correct_tags - correct misspelt tags in a CIF file and output made changes into the standard I/O streams. By default, only tags from CIF Core and CIF COD dictionaries with extra '^_+' prefixes are corrected. Additionally, a replacement list file can be provided for the correction of misspelt tags.
SYNOPSIS
cif_correct_tags --options input.cif input*.cif
DESCRIPTION
Correct misspelt tags in a CIF file and output made changes into the standard I/O streams. By default, only tags from CIF Core and CIF COD dictionaries with extra '^_+' prefixes are corrected. Additionally, a replacement list file can be provided for the correction of misspelt tags.
OPTIONS
--keep-tag-order Keep the original tag order in CIF file (default). --sort-tags Reorder tags in CIF file according to COD. -r, --replacement-list 'replacement-file.lst' Name of the multi-line replacement list file with entries of form '_incorrect_tag _correct_tag' to be used in the correction of misspelt tags. --use-perl-parser Use the Perl-only CIF parser. --use-c-parser Use the speed-optimised C/Perl parser. Default. --cif-input Use CIF format for input (default). --json-input Use JSON format for input. --cif-output Use CIF format for output (default). --json-output Use JSON format for output. --cif Use CIF format for both input and output (default). --json Use JSON format for both input and output. --help, --usage Output a short usage message (this message) and exit. --version Output version information and exit.
REPORTING BUGS
Report cif_correct_tags bugs using e-mail: cod-bugs@ibt.lt CIF_CORRECT_TAGS(1)