Provided by: cct_20170919+dfsg-1_all
fetch_all_refseq_bacterial_genomes - visually comparing bacterial, plasmid, chloroplast, or mitochondrial sequences
USAGE: fetch_all_refseq_bacterial_genomes -o DIR DESCRIPTION: Downloads all bacterial RefSeq sequences form NCBI in GenBank format. The --min and --max options can be used to restrict the size of the returned sequences. REQUIRED ARGUMENTS: -o, --output DIR The output directory to contain the downloaded GenBank files. OPTIONAL ARGUMENTS: -m, --min INTEGER Records with a sequence length shorter than this value will be ignored. -x, --max INTEGER Records with a sequence length longer than this value will be ignored. -h, --help Show this message. EXAMPLE: fetch_all_refseq_bacterial_genomes -o my_project/comparison_genomes
This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage of the program.