Provided by: emboss_6.6.0+dfsg-7ubuntu2_amd64 bug

NAME

       ontotext - Get ontology term(s) original full text

SYNOPSIS

       ontotext -oboterms obo [-subclasses boolean] [-obsolete boolean] -outfile outfile

       ontotext -help

DESCRIPTION

       ontotext is a command line program from EMBOSS (“the European Molecular Biology Open
       Software Suite”). It is part of the "Ontology,Data retrieval:Ontology data,Data
       retrieval:Text data" command group(s).

OPTIONS

   Input section
       -oboterms obo

   Additional section
       -subclasses boolean
           Extend the query matches to include all terms which are specialisations (sub-classes)
           of the matched terms. Default value: N

       -obsolete boolean
           The default behaviour is to not use or return obsolete terms. This option if set will
           include all terms. Default value: N

   Advanced section
   Output section
       -outfile outfile

BUGS

       Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or
       directly to the EMBOSS developers
       (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

SEE ALSO

       ontotext is fully documented via the tfm(1) system.

AUTHOR

       Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
           Wrote the script used to autogenerate this manual page.

COPYRIGHT

       This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package.
       It can be redistributed under the same terms as EMBOSS itself.