NAME

       rnr-mast - computes maximum agreement trees for unrooted input sets

SYNOPSIS

       rnr-mast -i <bootTrees> -n <runId> [-w <workingDir>] [-h] [-a] [-x <excludeFile>]

OPTIONS

   OBLIGATORY
       -i <bootTrees>
              A collection of bootstrap trees.

       -n <runId>
              An identifier for this run.

   OPTIONAL
       -a     Compute  all  possible MAST trees. Without this flag, you will only get a few MASTs
              that are easy to compute. As there may be an exponential number of MASTs, use  this
              option with care.

       -w <workDir>
              A working directory where output files are created.

       -x <excludeFile>
              Exclude  the taxa in this file (one taxon per line) prior to computing the MAST. If
              you compute all MASTs anyway, this option is option will not  be  useful.  However,
              you can use this option to speed up things.

       -h     This help file.

AUTHOR

       This  manpage was written by Andreas Tille for the Debian distribution and can be used for
       any other usage of the program.