NAME

       rnr-tii - computes the taxonomic instability index

SYNOPSIS

       rnr-tii -i <bootTrees> -n <runId> [-w <workingDir>] [-h] [-x <excludeFile>]

OPTIONS

   OBLIGATORY
       -i <bootTrees>
              A collection of bootstrap trees.

       -n <runId>
              An identifier for this run.

   OPTIONAL
       -z <z> The  exponent  used  in  the  TII  formula.  Use  small  values  to emphasize close
              relationships and vice versa. DEFAULT: 2

       -w <workDir>
              A working directory where output files are created.

       -x <excludeFile>
              Exclude the taxa in this file (one taxon per line) prior to computing the TII.

       -h     This help file.

AUTHOR

       This manpage was written by Andreas Tille for the Debian distribution and can be used  for
       any other usage of the program.