Provided by: libbio-perl-perl_1.7.2-3_all bug


       Bio::LiveSeq::Translation - Translation class for LiveSeq


         #documentation needed


       This stores information about aminoacids translations of transcripts.  The implementation
       is that a Translation object is the translation of a Transcript object, with different
       possibilities of manipulation, different coordinate system and eventually its own ranges
       (protein domains).

AUTHOR - Joseph A.L. Insana



       The rest of the documentation details each of the object methods. Internal methods are
       usually preceded with a _

         Title   : new
         Usage   : $protein = Bio::LiveSeq::Translation->new(-transcript => $transcr);

         Function: generates a new Bio::LiveSeq::Translation
         Returns : reference to a new object of class Translation
         Errorcode -1
         Args    : reference to an object of class Transcript

         Title   : valid
         Usage   : $transcript = $obj->get_Transcript()
         Function: retrieves the reference to the object of class Transcript (if any)
                   attached to a LiveSeq object
         Returns : object reference
         Args    : none

         Title   : aa_ranges
         Usage   : @proteinfeatures = $translation->aa_ranges()
         Function: to retrieve all the LiveSeq AARange objects attached to a
                   Translation, usually created out of a SwissProt database entry
                   crossreferenced from an EMBL CDS feature.
         Returns : an array
         Args    : none