Provided by: cmtk_2.1.0-1_amd64 bug

NAME

       average_edt - Shape-based averaging

SYNOPSIS

       average_edt [options] list0 [list1 ...]

DESCRIPTION

       Average segmentations (label fields) using the Euclidean Distance Transform.

OPTIONS

   Global Toolkit Options (these are shared by all CMTK tools)
       --help
            Write list of basic command line options to standard output.

       --help-all
            Write complete list of basic and advanced command line options to standard output.

       --wiki
            Write list of command line options to standard output in MediaWiki markup.

       --man
            Write man page source in 'nroff' markup to standard output.

       --version
            Write toolkit version to standard output.

       --echo
            Write the current command line to standard output.

       --verbose-level <integer>
            Set verbosity level.

       --verbose, -v
            Increment verbosity level by 1 (deprecated; supported for backward compatibility).

       --threads <integer>
            Set maximum number of parallel threads (for POSIX threads and OpenMP).

   Main Options
       --interpolate-image
            Interpolate target image, compute distance on reference grid

       --interpolate-distance
            Compute  distance  maps  on  target  image grid and interpolate distance [This is the
            default]

       --feature-window-radius <float>
            Radius of feature value window.  [Default: -1]

       --scale-to-labels
            Scale intensity images to given number of labels.

       --downsample-volume <string>
            Volume (atlas) downsampling factors 'dx,dy,dz' [Default: NONE]

       --num-labels <integer>, -n <integer>
            Number of labels. It is assumed  that  only  values  [0..num]  occur  in  the  images
            [Default: ]

       --padding <float>, -p <float>
            Padding value in input image [Default: disabled]

       --replace-from <string>
            Replace from pattern

       --replace-to <string>
            Replace to pattern

       --output <string>, -o <string>
            File name for output segmentation file.  [Default: NONE]

       --write-dmap <string>
            Write intermediate distance maps [file name mask] [Default: NONE]

       --write-lmap <string>
            Write intermediate label maps [file name mask] [Default: NONE]

AUTHORS

       Torsten Rohlfing, Michael P. Hasak, Greg Jefferis, Calvin R. Maurer, Daniel B. Russakoff

LICENSE

       http://www.fsf.org/licensing/licenses/gpl.html

BUGS

       Report bugs at http://nitrc.org/projects/cmtk/

ACKNOWLEDGMENTS

       From  April 2009 through September 2011, CMTK Development and Maintenance was supported by
       the National Institute  of  Biomedical  Imaging  and  Bioengineering  under  Grant  No.R01
       EB008381 (PI: Torsten Rohlfing).