NAME

       ANTSJacobian - part of ANTS registration suite

SYNOPSIS

       ANTSJacobian  ImageDim  gWarp outfile uselog maskfn normbytotalbool use-2nd-order-central-
       difference-boolean

DESCRIPTION

              for example ANTSJacobian 3  myWarp.nii   Output  1   templatebrainmask.nii   1  the
              last  1  normalizes  the jacobian by the total in the mask.  use this to adjust for
              head size.