Provided by: edtsurf_0.2009-3_amd64
EDTSurf - quick and accurate construction of macromolecular surfaces
EDTSurf -i pdbname ...
EDTSurf is a open source program to construct triangulated surfaces for macromolecules. It generates three major macromolecular surfaces: van der Waals surface, solvent-accessible surface and molecular surface (solvent-excluded surface). EDTsurf also identifies cavities which are inside of macromolecules.
-o outname -t 1-MC 2-VCMC -s 1-VWS 2-SAS 3-MS 4-SES -c 1-pure 2-atom 3-chain -p probe radius [0,2.0] -f scale factor (0,20.0] -h 1-in and out 2-out 3-in output1: outname.ply output2: outname.asa output3: outname-cav.pdb