Provided by: bowtie_1.0.0-5_amd64 bug


       bowtie-inspect - extracts information from a bowtie index


       bowtie-inspect [options]* <ebwt_base>


              ebwt filename minus trailing .1.ebwt/.2.ebwt

              By  default,  prints  FASTA records of the indexed nucleotide sequences to standard
              out.  With -n, just prints names.  With -s, just prints  a  summary  of  the  index
              parameters and sequences.  With -e, preserves colors if applicable.


       -a/--across <int>
              Number of characters across in FASTA output (default: 60)

              Print reference sequence names only

              Print summary incl. ref names, lengths, index properties

              Reconstruct reference from ebwt (slow, preserves colors)

              Verbose output (for debugging)

              print detailed description of tool and its options

       --help print this usage message

       64-bit  Built  on  batsu  Thu May 30 11:17:56 UTC 2013 Compiler: gcc version 4.8.0 (Ubuntu
       4.8.0-8ubuntu1)  Options:   -O3     -Wl,--hash-style=both   -D_FORTIFY_SOURCE=2   -g   -O2
       -fstack-protector   --param=ssp-buffer-size=4  -Wformat  -Werror=format-security   -g  -O2
       -fstack-protector     --param=ssp-buffer-size=4      -Wformat      -Werror=format-security
       -Wl,-Bsymbolic-functions -Wl,-z,relro Sizeof {int, long, long long, void*, size_t, off_t}:
       {4, 8, 8, 8, 8, 8}