Provided by: bioperl_1.6.923-1_all
bp_chaos_plot - a chaos plot from DNA and RNA sequences
bp_chaos_plot.pl -i/--input=INPUTFILE -f/--format=SEQFORMAT -o/--output=OUTPUTFILE -g/--graphics=GRAPHIC FORMAT -w/--width=WIGHT -h/--height=HEIGHT
This scripts generates image files using GD image library to visualize nucleotide sequences using chaos plot.
Valid graphics formats are currently gd, gd2, png, wbmp, jpeg and gif. The default size of the image file is 600x400. The sequence input can be provided using any of the three methods: unnamed argument bp_chaos_plot filename named argument bp_chaos_plot -i filename standard input bp_chaos_plot < filename
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AUTHOR - Jason Stajich
This code is based on EMBOSS C code for chaos.c by Ian Longden. Included are documentation from EMBOSS code: Chaos produces a chaos plot. The original application is part of the ACEDB genome database package, written by ** Richard Durbin (MRC LMB, UK) firstname.lastname@example.org, and Jean Thierry-Mieg (CRBM du CNRS, France) email@example.com