Provided by: bioperl-run_1.6.9-2_all
multi_hmmsearch - perform a hmmsearch into multiple FASTA files using an INDEX file
multi_hmmsearch -p hmm_file [-i] -f index_file
Not technically a Bio::Tools::Run script as this doesn't use any Bioperl or Bioperl-run components but it's useful. Mandatory Options: -p HMM profile to use for the search. -f INDEX file that contains a list of FASTA files for the multiple search. Special Options: -i Create a new index file with the resulting hmms files. This is useful if you want to pass this list as input arguments into another programs. -h Show this documentation.
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Mauricio Herrera Cuadra <mauricio-at-open-bio.org>