Provided by: fastx-toolkit_0.0.14-1_amd64
fastq_to_fasta - Convert FASTQ files to FASTA files
usage: fastq_to_fasta [-h] [-r] [-n] [-v] [-z] [-i INFILE] [-o OUTFILE] Part of FASTX Toolkit 0.0.14 by A. Gordon (email@example.com) [-h] = This helpful help screen. [-r] = Rename sequence identifiers to numbers. [-n] = keep sequences with unknown (N) nucleotides. Default is to discard such sequences. [-v] = Verbose - report number of sequences. If [-o] is specified, report will be printed to STDOUT. If [-o] is not specified (and output goes to STDOUT), report will be printed to STDERR. [-z] = Compress output with GZIP. [-i INFILE] = FASTA/Q input file. default is STDIN. [-o OUTFILE] = FASTA output file. default is STDOUT.
The quality of this automatically generated manpage might be insufficient. It is suggested to visit http://hannonlab.cshl.edu/fastx_toolkit/commandline.html to get a better layout as well as an overview about connected FASTX tools.