Provided by: genometools_1.5.1-2ubuntu1_amd64 bug


       gt-tallymer-mkindex - Count and index k-mers in the given enhanced suffix array for a
       fixed value of k.


       gt tallymer mkindex [options] -esa suffixerator-index [options]


           specify suffixerator-index (mandatory option) (default: undefined)

           Specify the mer size. (default: 20)

           Specify the minimum occurrence number for the mers to output/index (default: 0)

           Specify the maximum occurrence number for the mers to output/index (default: 0)

           specify prefix length for bucket boundary construction recommendation: use without
           argument; then a reasonable prefix length is automatically determined (default: 0)

           store the mers specified by options -maxocc and -minocc in an index (default:

           store counts of the mers (default: no)

           read enhanced suffix array sequentially instead of mapping it to memory (default: no)

           be verbose (default: no)

           display help and exit

           display version information and exit


       Report bugs to <>.

                                            10/07/2012                      GT-TALLYMER-MKINDE(1)