Provided by: libbio-perl-perl_1.6.923-1_all bug


       Bio::SearchIO::Writer::BSMLResultWriter - BSML output writer


         use Bio::SearchIO;
         my $in = Bio::SearchIO->new(-file   => 'result.blast',
                                    -format => 'blast');
         my $out = Bio::SearchIO->new(-output_format  => 'BSMLResultWriter',
                                     -file           => ">result.bsml");
         while( my $r = $in->next_result ) {


       This is a writer to produce BSML for a search result.


   Mailing Lists
       User feedback is an integral part of the evolution of this and other Bioperl modules. Send
       your comments and suggestions preferably to the Bioperl mailing list.  Your participation
       is much appreciated.
                  - General discussion  - About the mailing lists

       Please direct usage questions or support issues to the mailing list:

       rather than to the module maintainer directly. Many experienced and reponsive experts will
       be able look at the problem and quickly address it. Please include a thorough description
       of the problem with code and data examples if at all possible.

   Reporting Bugs
       Report bugs to the Bioperl bug tracking system to help us keep track of the bugs and their
       resolution. Bug reports can be submitted via the web:

AUTHOR - Jason Stajich

       Email jason-at-bioperl-dot-org


       The rest of the documentation details each of the object methods.  Internal methods are
       usually preceded with a _

        Title   : new
        Usage   : my $obj = Bio::SearchIO::Writer::BSMLResultWriter->new();
        Function: Builds a new Bio::SearchIO::Writer::BSMLResultWriter object
        Returns : an instance of Bio::SearchIO::Writer::BSMLResultWriter
        Args    :

        Purpose   : Produces data for each Search::Result::ResultI in a string.
                  : This is an abstract method. For some useful implementations,
                  : see,,
                  : and
        Usage     : print $writer->to_string( $result_obj, @args );
        Argument  : $result_obj = A Bio::Search::Result::ResultI object
                  : @args = any additional arguments used by your implementation.
        Returns   : String containing data for each search Result or any of its
                  : sub-objects (Hits and HSPs).
        Throws    : n/a

perl v5.18.2                                2014-01-1Bio::SearchIO::Writer::BSMLResultWriter(3pm)