NAME

       CADD - A computer aided drug design using Vision

SYNOPSIS

       runCADD [options] [filenames]

DESCRIPTION

       This  manual  page  is  an almost literal translation of the output provided by runCADD -h
       command.

OPTIONS

       A summary of options is  included  below.   For  a  complete  description,  refer  to  the
       tutorials and documentation that is available online.

       Files  <filenames>  ending  in "net.py" will be laoded as networks in vision.  Other files
       will   be   executed   as   Python   scripts    in    which    "ed"    refers    to    the
       VisualProgrammingEnvironment instance.

       -h, --help
              Show summary of options.

       -e, --runAndExit
              run the networks and exit

       -p, --ipython
              create an ipython shell instead of a python shell

       -r, --run
              run the networks on the command line

       -s, --noSplash
              doesn't show the CADD splash screen (works only if registered)

       -t, --NoTerminal
              vision provides its own shell (under menu 'Edit') instead of the terminal

       --resourceFolder foldername
              stores resource file under .name (defaults to .mgltools)

       port values can be passed on the command line (but not to macros):
                    Network_net.py nodeName:portName:value

SEE ALSO

       http://mgltools.scripps.edu

AUTHOR

       runCADD  was written by researchers of the Molecular Graphics Lab at the Scripps Institute
       <mgltools@scripps.edu>.

       This manual page was written by Thorsten Alteholz  <debian@alteholz.de>,  for  the  Debian
       project (but may be used by others).

                                          July  1, 2011                                   CADD(1)