Provided by: libace-perl_1.92-4_amd64
Ace::Graphics::Glyph::transcript - The "gene" glyph
See L<Ace::Graphics::Panel> and L<Ace::Graphics::Glyph>.
This glyph draws a series of filled rectangles connected by up-angled connectors or "hats". The rectangles indicate exons; the hats are introns. The direction of transcription is indicated by a small arrow at the end of the glyph, rightward for the + strand. The feature must respond to the exons() and optionally introns() methods, or it will default to the generic display. Implied introns (not returned by the introns() method) are drawn in a contrasting color to explicit introns. OPTIONS In addition to the common options, the following glyph-specific option is recognized: Option Description Default ------ ----------- ------- -implied_intron_color The color to use for gaps gray not returned by the introns() method. -draw_arrow Whether to draw arrowhead true indicating direction of transcription.
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Ace::Sequence, Ace::Sequence::Feature, Ace::Graphics::Panel, Ace::Graphics::Track, Ace::Graphics::Glyph::anchored_arrow, Ace::Graphics::Glyph::arrow, Ace::Graphics::Glyph::box, Ace::Graphics::Glyph::primers, Ace::Graphics::Glyph::segments, Ace::Graphics::Glyph::toomany, Ace::Graphics::Glyph::transcript,
Lincoln Stein <firstname.lastname@example.org>. Copyright (c) 2001 Cold Spring Harbor Laboratory This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself. See DISCLAIMER.txt for disclaimers of warranty.