NAME

       pymvpa2 - command line interface for PyMVPA

SYNOPSIS

       pymvpa2   [-h]   [--version]  [--dbg]  [--dbg-channel  COMMON_DEBUG]  [--preload  PRELOAD]
       [--verbose                                                               [COMMON_VERBOSE]]
       {info,mkds,mkevds,describe,dump,preproc,crossval,searchlight,select,atlaslabeler,exec,ofmotionqc,ttest}
       ...

DESCRIPTION

       This is the command line interface of the  PyMVPA  framework.  Specific  functionality  is
       provided through a collection of sub-commands.  Available sub-commands are:

       info:         Query various information about a PyMVPA installation.

       mkds:         Create a PyMVPA dataset from various sources.

       mkevds:       Extract (multi-sample) events from a dataset

       describe:     Describe a dataset's content

       dump:         Dump dataset components in various formats

       preproc:      Preprocess a PyMVPA dataset.

       crossval:     Cross-validation of a learner's performance

       searchlight:  Traveling ROI analysis

       select:       Select a subset of samples and/or features from a dataset

       atlaslabeler: Query atlases for anatomical labels of voxel coordinates, or their

              statistics

       exec:         Execute arbitrary Python expressions (on datasets)

       ofmotionqc:   Generate a QC plot for BOLD fMRI motion estimates from an OpenFMRI

              dataset.

       ttest:        t-test across multiple volumes against some chance level

       Detailed  usage information for individual commands is available via command-specific help
       options, i.e.: bin/pymvpa2 <command> --help

OPTIONS

       -h, --help, --help-np
              show this help message and exit. --help-np forcefully disables the use of  a  pager
              for displaying the help.

       --version
              show program's version and license information and exit

       --dbg  invoke a debugger when a crash occurs

       --dbg-channel COMMON_DEBUG
              enable debug channel (see 'info' command for available channels)

       --preload PRELOAD
              filename  of  a  custom  Python  script  that is executed prior to, and in the same
              session  as  the  actual  command.  This  can  be  used  to  modify  the  execution
              environment,  for example creating a custom classifier instance. This option can be
              given multiple times, and  the  associated  scripts  are  ran  in  order  of  their
              appearance on the command line.

       --verbose [COMMON_VERBOSE]
              output verbosity level

AUTHOR

       Written by Michael Hanke & Yaroslav Halchenko, and numerous other contributors.

COPYRIGHT

       Copyright © 2006-2015 PyMVPA developers

       Permission  is  hereby  granted,  free  of  charge, to any person obtaining a copy of this
       software and associated documentation files (the "Software"),  to  deal  in  the  Software
       without  restriction, including without limitation the rights to use, copy, modify, merge,
       publish, distribute, sublicense, and/or sell copies of the Software, and to permit persons
       to whom the Software is furnished to do so, subject to the following conditions:

       The  above  copyright notice and this permission notice shall be included in all copies or
       substantial portions of the Software.

       THE SOFTWARE IS PROVIDED "AS IS", WITHOUT  WARRANTY  OF  ANY  KIND,  EXPRESS  OR  IMPLIED,
       INCLUDING  BUT  NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR
       PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE  LIABLE
       FOR  ANY  CLAIM,  DAMAGES  OR  OTHER  LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR
       OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR  THE  USE  OR  OTHER
       DEALINGS IN THE SOFTWARE.