NAME

       PDL::IO - An overview of the modules in the PDL::IO namespace.

SYNOPSIS

        # At your system shell, type:
        perldoc PDL::IO

DESCRIPTION

       PDL contains many modules for displaying, loading, and saving data.

       •   Perlish or Text-Based

           A few IO modules provide Perl-inspired capabilities.  These are PDL::IO::Dumper and
           PDL::IO::Storable.  PDL::IO::Misc provides simpler routines for dealing with delimited
           files, though its capabilities are limited to tabular or at most 3-d data sets.

       •   Raw Format

           PDL has two modules that store their data in a raw binary format; they are
           PDL::IO::FastRaw and PDL::IO::FlexRaw.  They are fast but the files they produce will
           not be readable across different architectures.  These two modules are so similar that
           they could probably be combined.

       •   Data Browsing

           At the moment, only PDL::IO::Browser provides data browsing functionality.

       •   Image Handling

           PDL has a handful of modules that will load images into piddles for you.  They include
           PDL::IO::Dicom, PDL::IO::FITS, PDL::IO::GD, PDL::IO::Pic, and PDL::IO::Pnm.  However,
           PDL::IO::FITS should also be considered something of a general data format.

       •   Disk Caching

           Both PDL::IO::FastRaw and PDL::IO::FlexRaw provide for direct piddle-to-disk mapping,
           but they use PDL's underlying mmap functionality to do it, and that doesn't work for
           Windows.  However, users of all operating systems can still use PDL::DiskCache, which
           can use any desired IO read/write functionality (though you may have to write a small
           wrapper function).

       •   General Data Storage Formats

           PDL has a number of modules that interface general data storage libraries.  They
           include PDL::IO::HDF and PDL::IO::NDF (the latter is now a separate CPAN module).
           There is a PDL::IO::IDL, though at the moment it is not distributed with PDL.
           PDL::IO::FITS is something of a general data format, since piddle data can be stored
           to a FITS file without loss.  PDL::IO::FlexRaw and PDL::IO::FastRaw read and write
           data identical C's low-level "write" function and PDL::IO::FlexRaw can work with
           FORTRAN 77 UNFORMATTED files.  FlexRaw and Storable provide general data storage
           capabilities.  Finally, PDL can read Grib (weather-data) files using the CPAN module
           PDL::IO::Grib.

       •   Making Movies

           You can make an MPEG animation using PDL::IO::Pic's wmpeg function.

       Here's a brief summary of all of the modules, in alphabetical order.

   PDL::DiskCache
       The DiskCache module allows you to tie a Perl array to a collection of files on your disk,
       which will be loaded into and out of memory as piddles.  Although the module defaults to
       working with FITS files, it allows you to specify your own reading and writing functions.
       This allows you to vastly streamline your code by hiding the unnecessary details of
       loading and saving files.

       If you find yourself writing scripts to procss many data files, especially if that data
       processing is not necessarily in sequential order, you should consider using
       PDL::DiskCache.  To read more, check the PDL::DiskCache documentation.

   PDL::IO::Browser
       The Browser module provides a text-based data browser for 2D data sets.

       It uses the CURSES library to do the scrolling, so if your operating system does not have
       the cureses library, you won't be able to install this on your machine.  (Note that the
       package containing the header files for the CURSES library may be called "libcurses" or
       possibly "libncurses".)

       PDL::IO::Browser is not installed by default because it gives trouble on Mac OS X, and not
       enough is known to fix the problem.  If you want to enable it, edit the perldl
       configuration file and rebuild PDL.  To learn more about editing the configuration file,
       see the INSTALLATION section in the FAQ.  (Also, if you are familiar with CURSES on Mac,
       your help would be much appreciated!)

       To see if the module is installed on your machine (and to get more information about
       PDL::IO::Browser), follow this link or type at the system prompt:

        perldoc PDL::IO::Browser

       If you want to get more information about PDL::IO::Browser and it's not installed on your
       system, I'm afraid you'll have to pick out the pod from the source file, which can be
       found online at
       <http://pdl.git.sourceforge.net/git/gitweb.cgi?p=pdl/pdl;a=blob_plain;f=IO/Browser/browser.pd;hb=HEAD>.

   PDL::IO::Dicom
       DICOM is an image format, and this module allows you to read image files with the DICOM
       file format.  To read more, check the PDL::IO::Dicom documentation.

   PDL::IO::Dumper
       Provides functionality similar to Data::Dumper for piddles.  Data::Dumper stringifies a
       data structure, creating a string that can be "eval"ed to reproduce the original data
       structure.  It's also usually suitable for printing, to visualize the structure.

       To read more, check the PDL::IO::Dumper documentation.  See also PDL::IO::Storable for a
       more comprehensive structured data solution.

   PDL::IO::FastRaw
       Very simple module for quickly writing, reading, and memory-mapping piddles to/from disk.
       It is fast to learn and fast to use, though you may be frustrated by its lack of options.
       To quote from the original POD:

       "The binary files are in general NOT interchangeable between different architectures since
       the binary file is simply dumped from the memory region of the piddle.  This is what makes
       the approach efficient."

       This creates two files for every piddle saved - one that stores the raw data and another
       that stores the header file, which indicates the dimensions of the data stored in the raw
       file.  Even if you save 1000 different piddles with the exact same dimensions, you will
       still need to write out a header file for each one.  You cannot store multiple piddles in
       one file.

       Note that at the time of writing, memory-mapping is not possible on Windows.

       For more details, see PDL::IO::FastRaw.  For a more flexible raw IO module, see
       PDL::IO::FlexRaw.

   PDL::IO::FITS
       Allows basic reading and writing of FITS files.  You can read more about FITS formatted
       files at <http://fits.gsfc.nasa.gov/fits_intro.html> and
       <http://en.wikipedia.org/wiki/FITS>.  It is an image format commonly used in Astronomy.

       This module may or may not be installed on your machine.  To get more information, check
       online at <http://pdl.sourceforge.net/PDLdocs/IO/FITS.html>.  To see if the module is
       installed on your machine, follow this link or type at the system prompt:

        perldoc PDL::IO::FITS

   PDL::IO::FlexRaw
       Somewhat smarter module (compared to FastRaw) for reading, writing, and memory mapping
       piddles to disk.  In addition to everything that FastRaw can do, FlexRaw can also store
       multiple piddles in a single file, take user-specified headers (so you can use one header
       file for multiple files that have identical structure), and read compressed data.
       However, FlexRaw cannot memory-map compressed data, and just as with FastRaw, the format
       will not work across multiple architectures.

       FlexRaw and FastRaw produce identical raw files and have essentially identical
       performance.  Use whichever module seems to be more comfortable.  I would generally
       recommend using FlexRaw over FastRaw, but the differences are minor for most uses.

       Note that at the time of writing, memory-mapping is not possible on Windows.

       For more details on FlexRaw, see PDL::IO::FlexRaw.

   PDL::IO::GD
       GD is a library for reading, creating, and writing bitmapped images, written in C.  You
       can read more about the C-library here: <http://www.libgd.org/>.

       In addition to reading and writing .png and .jpeg files, GD allows you to modify the
       bitmap by drawing rectangles, adding text, and probably much more.  The documentation can
       be found here.  As such, it should probably be not only considered an IO module, but a
       Graphics module as well.

       This module provides PDL bindings for the GD library, which ought not be confused with the
       Perl bindings.  The perl bindings were developed independently and can be found at GD, if
       you have Perl's GD bindings installed.

   PDL::IO::Grib
       A CPAN module last updated in 2000 that allows you to read Grib files.  GRIB is a data
       format commonly used in meteorology.  In the off-chance that you have it installed, you
       should read PDL::IO::Grib's documenation.

   PDL::IO::HDF, PDL::IO::HDF5
       Provides an interface to HDF4 and HDF5 file formats, which are kinda like cross-platform
       binary XML files.  HDF stands for Heierarchicl Data Format.  HDF was originally developed
       at the NCSA.  To read more about HDF, see <http://www.hdfgroup.org/>.  Note that HDF5 is
       not presently distributed with PDL, and neither HDF4 nor HDF5 will be installed unless you
       have the associated C libraries that these modules interface.  Also note that the HDF5
       library on CPAN is rather old and somebody from HDF contacted the mailing list in the Fall
       of 2009 to develop new and better HDF5 bindings for Perl.

       You should look into the PDL::IO::HDF \fIs0(4) documentation or PDL::IO::HDF5
       documentation, depending upon which module you have installed.

   PDL::IO::IDL
       Once upon a time, PDL had a module for reading IDL data files.  Unfortunately, it cannot
       be distributed because the original author, Craig DeForest, signed the IDL license
       agreement and was unable to negotiate the administrative hurdles to get it published.
       However, it can be found in Sourceforge's CVS attic, and any PDL user who has not signed
       IDL's license agreement can fix it up and resubmit it.

   PDL::IO::Misc
       Provides mostly text-based IO routines.  Data input and output is restricted mostly to
       tabular (i.e. two-dimensional) data sets, though limited support is provided for 3d data
       sets.

       Alternative text-based modules support higher dimensions, such as PDL::IO::Dumper and
       PDL::IO::Storable.  Check the PDL::IO::Misc documentation for more details.

   PDL::IO::NDF
       Starlink developed a file format for N-Dimensional data Files, which it cleverly dubbed
       NDF.  If you work with these files, you're in luck!  Check the PDL::IO::NDF documentation
       for more details.

   PDL::IO::Pic
       Provides reading/writing of images to/from piddles, as well as creating MPEG animations!
       The module uses the netpbm library, so you will need that on your machine in order for
       this to work.  To read more, see the PDL::IO::Pic documentation.  Also look into the next
       module, as well as PDL::IO::GD.

   PDL::IO::Pnm
       Provides methods for reading and writing pnm files (of which pbm is but one).  Check the
       PDL::IO::Pnm documentation for more details.  Also check out the previous module and
       PDL::IO::GD.

   PDL::IO::Storable
       Implements the relevant methods to be able to store and retrieve piddles via Storable.
       True, you can use many methods to save a single piddle.  In contrast, this module is
       particularly useful if you need to save a complex Perl structure that contain piddles,
       such as an array of hashes, each of which contains piddles.

       Check the PDL::IO::Storable documentation for more details.  See also PDL::IO::Dumper for
       an alternative stringifier.

COPYRIGHT

       Copyright 2010 David Mertens (dcmertens.perl@gmail.com). You can distribute and/or modify
       this document under the same terms as the current Perl license.

       See: http://dev.perl.org/licenses/