NAME

       bam2wig - convert BAM to WIG

SYNOPSIS

       bam2wig [-r region] [-t trackname] <in.bam>

OPTIONS

       File needs to be sorted by Reference ID (i.e. target name) Use 'samtools sort <in.bam>' to
       such effect.

   Parameters:
       -r
           Allows to specify a target region, e.g. 'chr3L:10-250' This option can only be used if
           an index file exists, see: samtools index

       -t
           string provided as track name

AUTHORS

       AUGUSTUS was written by M. Stanke, O. Keller, S. König, L. Gerischer and L. Romoth.

ADDITIONAL DOCUMENTATION

       An exhaustive documentation can be found in the file /usr/share/augustus/README.TXT.

                                                                                       BAM2WIG(1)