NAME

       extractBCITrees  - part of mauveAligner package reads all trees and their posterior from a set of MrBayes
       .trprobs files

SYNOPSIS

       extractBCITrees <random seed> <BCI threshold> <max output trees> <MrBayes .trprobs input  file  1  ..  N>
       <nexus output file>

DESCRIPTION

       This  program  reads  all  trees  and  their  posterior from a set of MrBayes .trprobs files and sums and
       normalizes posteriors for each topology.  All trees that meet a Bayes Credible Interval threshold will be
       saved, up to some maximum number of trees.  <BCI Threshold> A number between  0  and  1  giving  the  BCI
       threshold.   0.9  is  a  good  choice.  <max output trees>      Limit the output to this many trees.  All
       trees in the input file must have the same number of taxa and the same taxon labels

extractBCITrees 1.2.0+4713                         April 2015                                 EXTRACTBCITREES(1)