NAME

       extractUnmappedSubreads.py - Extract unmapped subreads from a fasta file

DESCRIPTION

       usage: extractUnmappedSubreads.py [-h] [--verbose] [--version] [--profile]

       [--debug]
              fasta cmp.h5 [cmp.h5 ...]

       Extract unmapped subreads from a fasta file.

   positional arguments:
       fasta  a fasta file containing all subreads.

       cmp.h5 input cmp.h5 files.

   optional arguments:
       -h, --help
              show this help message and exit

       --verbose, -v
              Set the verbosity level (default: None)

       --version
              show program's version number and exit

       --profile
              Print runtime profile at exit (default: False)

       --debug
              Catch exceptions in debugger (requires ipdb) (default: False)

extractUnmappedSubreads.py 0.3.0                  January 2017                     EXTRACTUNMAPPEDSUBREADS.PY(1)