NAME

       frestml - Restriction site maximum Likelihood method

SYNOPSIS

       frestml -data discretestates [-weights properties] -intreefile tree [-njumble integer] -seed integer
               [-outgrno integer] [-allsites boolean] -lengths boolean [-sitelength integer] -global boolean
               -rough boolean -outfile outfile [-trout toggle] -outtreefile outfile [-printdata boolean]
               [-progress boolean] [-treeprint boolean]

       frestml -help

DESCRIPTION

       frestml is a command line program from EMBOSS (“the European Molecular Biology Open Software Suite”). It
       is part of the "Phylogeny:Molecular sequence" command group(s).

OPTIONS

   Input section
       -data discretestates
           File containing one or more sets of restriction data

       -weights properties
           Weights file

       -intreefile tree

   Additional section
       -njumble integer

       -seed integer
           Default value: 1

       -outgrno integer

       -allsites boolean
           Default value: Y

       -lengths boolean
           Default value: N

       -sitelength integer
           Default value: 6

       -global boolean
           Default value: N

       -rough boolean
           Default value: Y

   Output section
       -outfile outfile

       -trout toggle
           Default value: Y

       -outtreefile outfile

       -printdata boolean
           Default value: N

       -progress boolean
           Default value: Y

       -treeprint boolean
           Default value: Y

BUGS

       Bugs can be reported to the Debian Bug Tracking system (http://bugs.debian.org/emboss), or directly to
       the EMBOSS developers (http://sourceforge.net/tracker/?group_id=93650&atid=605031).

SEE ALSO

       frestml is fully documented via the tfm(1) system.

AUTHOR

       Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
           Wrote the script used to autogenerate this manual page.

COPYRIGHT

       This manual page was autogenerated from an Ajax Control Definition of the EMBOSS package. It can be
       redistributed under the same terms as EMBOSS itself.

PHYLIPNEW 3.69+20100721                            08/11/2010                                        FRESTML(1e)