NAME

       graphlan - circular representations of taxonomic and phylogenetic trees

SYNOPSIS

       graphlan  [-h]  [--format  ['output_image_format']]  [--warnings WARNINGS] [--positions POSITIONS] [--dpi
       image_dpi] [--size image_size] [--pad pad_in] [--external_legends] [-v] input_tree output_image

DESCRIPTION

       GraPhlAn is a software  tool  for  producing  high-quality  circular  representations  of  taxonomic  and
       phylogenetic   trees.   It   focuses   on   concise,   integrative,  informative,  and  publication-ready
       representations of phylogenetically- and taxonomically-driven investigation.

OPTIONS

   positional arguments:
       input_tree
              the input tree in PhyloXML format

       output_image
              the output image, the format is guessed from the extension unless  --format  is  given.  Available
              file formats are: png, pdf, ps, eps, svg

   optional arguments:
       -h, --help
              show this help message and exit

       --format ['output_image_format']
              set  the  format  of  the  output  image (default none meaning that the format is guessed from the
              output file extension)

       --warnings WARNINGS
              set whether warning messages should be reported or not (default 1)

       --positions POSITIONS
              set whether the absolute position of the points should be reported on the standard output. The two
              cohordinates are r and theta

       --dpi image_dpi
              the dpi of the output image for non vectorial formats

       --size image_size
              the size of the output image (in inches, default 7.0)

       --pad pad_in
              the distance between the most external graphical element and the border of the image

       --external_legends
              specify whether the two external legends should be put in separate file or keep  them  along  with
              the image (default behavior)

       -v, --version
              Prints the current GraPhlAn version and exit

AUTHOR

       The software was written by Nicola Segata <nsegata@hsph.harvard.edu>

       This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage
       of the program.

graphlan 1.1                                        June 2016                                        GRAPHLAN(1)