bionic (3) Bio::Restriction::IO::prototype.3pm.gz

Provided by: libbio-perl-perl_1.7.2-2_all bug

NAME
       Bio::Restriction::IO::prototype - prototype enzyme set


SYNOPSIS
       Do not use this module directly.  Use it via the Bio::Restriction::IO class.


DESCRIPTION
       This is a parser for the proto/neo file REBASE format, which contains prototype information as well as
       (in the neo file) neoschizomer data.


FEEDBACK
   Mailing Lists
       User feedback is an integral part of the evolution of this and other Bioperl modules. Send your comments
       and suggestions preferably to the Bioperl mailing lists Your participation is much appreciated.

         bioperl-l@bioperl.org                  - General discussion
         http://bioperl.org/wiki/Mailing_lists  - About the mailing lists

   Support
       Please direct usage questions or support issues to the mailing list:

       bioperl-l@bioperl.org

       rather than to the module maintainer directly. Many experienced and reponsive experts will be able look
       at the problem and quickly address it. Please include a thorough description of the problem with code and
       data examples if at all possible.

   Reporting Bugs
       Report bugs to the Bioperl bug tracking system to help us keep track the bugs and their resolution.  Bug
       reports can be submitted via the web:

         https://github.com/bioperl/bioperl-live/issues


AUTHOR
       Rob Edwards, redwards@utmem.edu


CONTRIBUTORS
       Heikki Lehvaslaiho, heikki-at-bioperl-dot-org


APPENDIX
       The rest of the documentation details each of the object methods. Internal methods are usually preceded
       with a _

   read
        Title   : read
        Usage   : $renzs = $stream->read
        Function: reads all the restrction enzymes from the stream
        Returns : a Bio::Restriction::Restriction object
        Args    : none

   write
        Title   : write
        Usage   : $stream->write($renzs)
        Function: writes restriction enzymes into the stream
        Returns : 1 for success and 0 for error
        Args    : a Bio::Restriction::Enzyme
                  or a Bio::Restriction::EnzymeCollection object