Provided by: cpl-plugin-kmos-doc_1.4.3+dfsg-1_all 
NAME
kmos_std_star - Create the telluric correction frame.
SYNOPSIS
esorex kmos_std_star [OPTIONS] FILE.sof
DESCRIPTION
This recipe creates a telluric frame and a PSF frames.
Since there cannot be 1 std star per IFU in one exposure, we use several exposures in
order to have at least one standard star and one sky in each IFU. The frames are organised
following this logic: 1. For each IFU the first standard star in the list of frames is
taken. All subsequent standard star exposures for this IFU are ignored 2. A closest in
time sky exposure is uѕed 3. IFUs not containing a standard star and a sky will be empty
in the result
NOISE_SPEC contains the shot noise [sqrt(counts*gain)/gain] If the exposures have been
taken with KMOS_spec_cal_stdstarscipatt, an additional noise component is added: All
existing sky exposures for an IFU are subtracted pairwise, spectra are extracted and the
std deviation is computed
Input files:
DO KMOS
category Type Explanation Required #Frames
-------- ----- ----------- -------- -------
STD RAW Std. star & sky exposures Y >=1
XCAL F2D x calibration frame Y 1
YCAL F2D y calibration frame Y 1
LCAL F2D Wavelength calib. frame Y 1
MASTER_FLAT F2D Master flat frame Y 1
WAVE_BAND F2L Table with start-/end-wl Y 1
ILLUM_CORR F2I Illumination correction N 0,1
SOLAR_SPEC F1S Solar spectrum N 0,1
(only for G stars)
ATMOS_MODEL F1S Model atmospheric transmisson N 0,1
(only for OBAF stars in K band)
SPEC_TYPE_LOOKUP F2L LUT eff. stellar temperature N 0,1
Output files:
DO KMOS
category Type Explanation
-------- ----- -----------
TELLURIC F1I The normalised telluric spectrum
(including errors)
STAR_SPEC F1I The extracted star spectrum
(including errors)
STD_IMAGE F2I The standard star PSF images
STD_MASK F2I The mask used to extract the star spec
NOISE_SPEC F1I The extracted noise spectrum
OPTIONS
--startype <str>
The spectral type of the star (O, B, A, F, G) e.g. G4V (str; default: ´´). The full
name of this option for the EsoRex configuration file is
kmos.kmos_std_star.startype [default = ].
--imethod <str>
Method to use for interpolation. ["NN" (nearest neighbour), "lwNN" (linear weighted
nearest neighbor), "swNN" (square weighted nearest neighbor), "MS" (Modified
Shepard´s method), "CS" (Cubic spline)] (str; default: ´CS´). The full name of this
option for the EsoRex configuration file is kmos.kmos_std_star.imethod [default =
CS].
--fmethod <str>
Fitting method (gauss, moffat, profile (str; default: ´gauss´). The full name of
this option for the EsoRex configuration file is kmos.kmos_std_star.fmethod
[default = gauss].
--neighborhoodRange <float>
Defines the range to search for neighbors in pixels (float; default: 1.001). The
full name of this option for the EsoRex configuration file is
kmos.kmos_std_star.neighborhoodRange [default = 1.001].
--magnitude <str>
Star magnitude (2 values in HK, eg. 12.1,13.2) (str; default: ´´). The full name of
this option for the EsoRex configuration file is kmos.kmos_std_star.magnitude
[default = ].
--flux <bool>
TRUE: Apply flux conservation. FALSE: otherwise (bool; default: True). The full
name of this option for the EsoRex configuration file is kmos.kmos_std_star.flux
[default = True].
--save_cubes <bool>
Flag to save reconstructed cubes (bool; default: False). The full name of this
option for the EsoRex configuration file is kmos.kmos_std_star.save_cubes [default
= False].
--no_noise <bool>
Skip the noise computation on sky exposures (bool; default: False). The full name
of this option for the EsoRex configuration file is kmos.kmos_std_star.no_noise
[default = False].
--xcal_interpolation <bool>
Flag to Interpolate xcal between rotator angles (bool; default: True). The full
name of this option for the EsoRex configuration file is
kmos.kmos_std_star.xcal_interpolation [default = True].
--suppress_extension <bool>
Flag to Suppress filename extension (bool; default: False). The full name of this
option for the EsoRex configuration file is kmos.kmos_std_star.suppress_extension
[default = False].
--b_samples <long>
The number of samples in wavelength for the reconstructed cube (long; default:
2048). The full name of this option for the EsoRex configuration file is
kmos.kmos_std_star.b_samples [default = 2048].
--b_start <float>
The lowest wavelength [um] to use when reconstructing. Derived by default,
depending on the band (float; default: -1.0). The full name of this option for the
EsoRex configuration file is kmos.kmos_std_star.b_start [default = -1.0].
--b_end <float>
The highest wavelength [um] to use when reconstructing. Derived by default,
depending on the band (float; default: -1.0). The full name of this option for the
EsoRex configuration file is kmos.kmos_std_star.b_end [default = -1.0].
--mask_method <str>
Method used : mask, integrated or optimal (str; default: ´optimal´). The full name
of this option for the EsoRex configuration file is kmos.kmos_std_star.mask_method
[default = optimal].
--centre <str>
The centre of the circular mask (pixel) (str; default: ´7.5,7.5´). The full name of
this option for the EsoRex configuration file is kmos.kmos_std_star.centre [default
= 7.5,7.5].
--radius <float>
The radius of the circular mask (pixel) (float; default: 3.0). The full name of
this option for the EsoRex configuration file is kmos.kmos_std_star.radius [default
= 3.0].
--cmethod <str>
Apply "average", "median", "sum", "min_max." or "ksigma". (str; default: ´ksigma´).
The full name of this option for the EsoRex configuration file is
kmos.kmos_std_star.cmethod [default = ksigma].
--cpos_rej <float>
The positive rejection threshold for kappa-sigma-clipping (sigma). (float;
default: 3.0). The full name of this option for the EsoRex configuration file is
kmos.kmos_std_star.cpos_rej [default = 3.0].
--cneg_rej <float>
The negative rejection threshold for kappa-sigma-clipping (sigma). (float;
default: 3.0). The full name of this option for the EsoRex configuration file is
kmos.kmos_std_star.cneg_rej [default = 3.0].
--citer <long>
The number of iterations for kappa-sigma-clipping. (long; default: 3). The full
name of this option for the EsoRex configuration file is kmos.kmos_std_star.citer
[default = 3].
--cmax <long>
The number of maximum pixel values to clip with min/max-clipping. (long; default:
1). The full name of this option for the EsoRex configuration file is
kmos.kmos_std_star.cmax [default = 1].
--cmin <long>
The number of minimum pixel values to clip with min/max-clipping. (long; default:
1). The full name of this option for the EsoRex configuration file is
kmos.kmos_std_star.cmin [default = 1].
Note that it is possible to create a configuration file containing these options, along
with suitable default values. Please refer to the details provided by the 'esorex --help'
command.
SEE ALSO
The full documentation for the kmos pipeline can be downloaded as a PDF file using the
following URL:
ftp://ftp.eso.org/pub/dfs/pipelines/kmos/kmos-pipeline-manual-2.9.pdf
An overview over the existing ESO pipelines can be found on the web page
http://www.eso.org/sci/software/pipelines/.
Basic documentation about the EsoRex program can be found at the esorex (1) man page.
It is possible to call the pipelines from python using the python-cpl package. See
http://packages.python.org/python-cpl/index.html for further information.
The other recipes of the kmos pipeline are kmo_arithmetic(7), kmo_copy(7),
kmo_fit_profile(7), kmo_fits_strip(7), kmo_make_image(7), kmo_noise_map(7), kmo_rotate(7),
kmo_shift(7), kmo_sky_mask(7), kmo_stats(7), kmos_combine(7), kmos_dark(7),
kmos_extract_spec(7), kmos_flat(7), kmos_gen_reflines(7), kmos_gen_telluric(7),
kmos_illumination(7), kmos_reconstruct(7), kmos_sci_red(7), kmos_sky_tweak(7),
kmos_test(7), kmos_wave_cal(7)
VERSION
kmos_std_star 1.4.3
AUTHOR
Alex Agudo Berbel, Y. Jung <usd-help@eso.org>
BUG REPORTS
Please report any problems to usd-help@eso.org. Alternatively, you may send a report to
the ESO User Support Department <usd-help@eso.org>.
LICENSE
This file is part of the CRIRES Instrument Pipeline Copyright (C) 2002,2003 European
Southern Observatory
This program is free software; you can redistribute it and/or modify it under the terms of
the GNU General Public License as published by the Free Software Foundation; either
version 2 of the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY;
without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License along with this program;
if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston,
MA 02111-1307 USA