bionic (1) R_mds.1.gz

Provided by: seer_1.1.4-1build1_amd64 bug

NAME
       R_mds - project distance matrix into lower number of dimensions


SYNOPSIS
       R_mds -k <filtered_kmers.txt> -p <pheno_file>


DESCRIPTION
       Projects distance matrix into lower number of dimensions Requires R and rhdf5 to be installed, see github
       wiki for more details


OPTIONS
   Required
       -d, --dist
              Distance matrix output by kmds

       -p, --pheno
              Phenotype file used by seer

   Optional
       -o, --output
              Output prefix (default 'all_structure')

       --pc   Number of dimensions to project into (default 3)

       -R     R executable (default 'which R')

       -h, --help
              Displays this message


AUTHOR
       This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage
       of the program.