bionic (1) antsAlignOrigin.1.gz

NAME

       antsAlignOrigin - part of ANTS registration suite

DESCRIPTION

   COMMAND:
              antsAlignOrigin

              antsAlignOrigin,  applied  to  an  input image, transforms it according to a reference image and a
              transform (or a set of transforms).

   OPTIONS:
       -d, --dimensionality 2/3

              This option forces the image to be treated as a specified-dimensional  image.  If  not  specified,
              antsWarp tries to infer the dimensionality from the input image.

       -i, --input inputFileName

              Currently,  the  only  input  objects  supported are image objects. However, the current framework
              allows for warping of other objects such as meshes and point sets.

       -r, --reference-image imageFileName

              For warping input images, the reference image defines the spacing, origin, size, and direction  of
              the output warped image.

       -o, --output warpedOutputFileName

              [transform,alignedImage]

              One  can  either  output  the  warped  image  or,  if  the  boolean  is set, one can print out the
              displacement field based on thecomposite transform and the reference image.

       -h

              Print the help menu (short version).  <VALUES>: 0

       --help

              Print the help menu.  <VALUES>: 1, 0