bionic (1) blockmode.1gmt.gz

Provided by: gmt-common_5.4.3+dfsg-1_all bug

NAME

       blockmode - Block average (x, y, z) data tables by mode estimation

SYNOPSIS

       blockmode [ table ]
        -Iincrement
        -Rregion  [   -C  ]  [  -D[width][+c][+a|+l|+h ] [  -Er|s[-] ] [  -Q ] [  -V[level] ] [  -W[i|o][+s] ] [
       -bbinary ] [ -dnodata ] [ -eregexp ] [ -fflags ] [ -hheaders ] [ -iflags ] [ -oflags ] [ -r ] [ -:[i|o] ]

       Note: No space is allowed between the option flag and the associated arguments.

DESCRIPTION

       blockmode reads arbitrarily located (x,y,z) triples [or optionally weighted  quadruples  (x,y,z,w)]  from
       standard  input  [or  table] and writes to standard output mode estimates of position and value for every
       non-empty block in a grid region defined by the -R and -I arguments. Either  blockmean,  blockmedian,  or
       blockmode  should  be used as a pre-processor before running surface to avoid aliasing short wavelengths.
       These routines are also generally useful for decimating or averaging (x,y,z) data.  You  can  modify  the
       precision  of  the  output format by editing the FORMAT_FLOAT_OUT parameter in your gmt.conf file, or you
       may choose binary input and/or output to avoid loss of precision.

REQUIRED ARGUMENTS

       -Ixinc[unit][+e|n][/yinc[unit][+e|n]]
              x_inc [and  optionally  y_inc]  is  the  grid  spacing.  Optionally,  append  a  suffix  modifier.
              Geographical (degrees) coordinates: Append m to indicate arc minutes or s to indicate arc seconds.
              If one of the units e, f, k, M, n or u is appended instead, the increment is assumed to  be  given
              in  meter, foot, km, Mile, nautical mile or US survey foot, respectively, and will be converted to
              the equivalent degrees longitude at the middle latitude of the region (the conversion  depends  on
              PROJ_ELLIPSOID). If y_inc is given but set to 0 it will be reset equal to x_inc; otherwise it will
              be converted to degrees latitude. All coordinates: If +e is appended then the corresponding max  x
              (east)  or  y  (north) may be slightly adjusted to fit exactly the given increment [by default the
              increment may be adjusted slightly to fit  the  given  domain].  Finally,  instead  of  giving  an
              increment  you  may  specify  the  number of nodes desired by appending +n to the supplied integer
              argument; the increment is then recalculated  from  the  number  of  nodes  and  the  domain.  The
              resulting  increment  value  depends  on  whether  you  have  selected  a  gridline-registered  or
              pixel-registered grid; see App-file-formats for details. Note: if -Rgrdfile is used then the  grid
              spacing has already been initialized; use -I to override the values.

       -Rxmin/xmax/ymin/ymax[+r][+uunit] (more …)
              Specify the region of interest.

OPTIONAL ARGUMENTS

       table  3  [or  4,  see  -W] column ASCII data table file(s) [or binary, see -bi] holding (x,y,z[,w]) data
              values. [w] is an optional weight for the data. If no file is specified, blockmode will read  from
              standard input.

       -C     Use  the  center  of the block as the output location [Default uses the modal xy location (but see
              -Q)]. -C overrides -Q.

       -D[width][+c][+a|+l|+h ]
              Perform unweighted mode calculation via histogram binning, using the  specified  histogram  width.
              Append +c to center bins so that their mid point is a multiple of width [uncentered].  If multiple
              modes are found for a block we return the average mode [+a].  Append +l or +h to return the low of
              high  mode  instead,  respectively.  If width is not given it will default to 1 provided your data
              set only contains integers. Also, for integer data and integer bin width we enforce bin  centering
              (+c)  and  select the lowest mode (+l) if there are multiples. [Default mode is normally the Least
              Median of Squares (LMS) statistic].

       -E     Provide Extended report which includes s (the L1 scale of the mode), l, the lowest value,  and  h,
              the  high  value for each block. Output order becomes x,y,z,s,l,h[,w]. [Default outputs x,y,z[,w].
              See -W for w output.

       -Er|s[-]
              Provide source id s or record number r output,  i.e.,  append  the  source  id  or  record  number
              associated  with  the  modal value. If tied then report the record number of the higher of the two
              values; append - to instead report the record number of the lower value.  Note that  both  -E  and
              -Er[-]  may be specified.  For -Es we expect input records of the form x,y,z[,w],sid, where sid is
              an unsigned integer source id.

       -Q     (Quicker) Finds mode z and mean (x,y) [Default finds mode x, mode y, mode z].

       -V[level] (more …)
              Select verbosity level [c].

       -W[i|o][+s]
              Weighted modifier[s]. Unweighted input and output have 3 columns x,y,z; Weighted i/o has 4 columns
              x,y,z,w.   Weights  can be used in input to construct weighted modal values for each block. Weight
              sums can be reported in output for later combining several runs, etc. Use -W for weighted i/o, -Wi
              for weighted input only, and -Wo for weighted output only. [Default uses unweighted i/o].  If your
              weights are actually uncertainties (one sigma) then append +s and we compute weight = 1/sigma.

       -bi[ncols][t] (more …)
              Select native binary input. [Default is 3 (or 4 if -Wi is set)].

       -bo[ncols][type] (more …)
              Select native binary output. [Default is 3 (or 4 if -Wo is set)]. -E adds 3 additional columns.

       -d[i|o]nodata (more …)
              Replace input columns that equal nodata with NaN and do the reverse on output.

       -e[~]”pattern” | -e[~]/regexp/[i] (more …)
              Only accept data records that match the given pattern.

       -f[i|o]colinfo (more …)
              Specify data types of input and/or output columns.

       -h[i|o][n][+c][+d][+rremark][+rtitle] (more …)
              Skip or produce header record(s).

       -icols[+l][+sscale][+ooffset][,] (more …)
              Select input columns and transformations (0 is first column).

       -ocols[,…] (more …)
              Select output columns (0 is first column).

       -r (more …)
              Set pixel node registration [gridline]. Each block is the locus of points nearest the  grid  value
              location.  Consider an example with -R10/15/10/15 and -I1: With the -r option, 10 <= (x,y) < 11 is
              one of 25 blocks; without it 9.5 <= (x,y) < 10.5 is one of 36 blocks.

       -:[i|o] (more …)
              Swap 1st and 2nd column on input and/or output.

       -^ or just -
              Print a short message about the syntax of the command, then exits (NOTE: on Windows just use -).

       -+ or just +
              Print an extensive usage (help) message, including the explanation of any  module-specific  option
              (but not the GMT common options), then exits.

       -? or no arguments
              Print a complete usage (help) message, including the explanation of all options, then exits.

ASCII FORMAT PRECISION

       The  ASCII output formats of numerical data are controlled by parameters in your gmt.conf file. Longitude
       and latitude  are  formatted  according  to  FORMAT_GEO_OUT,  absolute  time  is  under  the  control  of
       FORMAT_DATE_OUT  and  FORMAT_CLOCK_OUT,  whereas general floating point values are formatted according to
       FORMAT_FLOAT_OUT. Be aware that the format in effect can lead to loss of precision in ASCII output, which
       can  lead  to  various  problems downstream. If you find the output is not written with enough precision,
       consider  switching  to  binary  output  (-bo  if  available)  or  specify  more   decimals   using   the
       FORMAT_FLOAT_OUT setting.

EXAMPLES

       To  find  5  by  5  minute block mode estimates from the double precision binary data in hawaii_b.xyg and
       output an ASCII table, run:

              gmt blockmode hawaii_b.xyg -R198/208/18/25 -I5m -bi3d > hawaii_5x5.xyg

       To determine the most frequently occurring values per  5x5  block  using  histogram  binning,  with  data
       representing integer counts, try

              gmt blockmode data.txt -R0/100/0/100 -I5 -r -C -D

SEE ALSO

       blockmean, blockmedian, gmt, gmt.conf, greenspline, nearneighbor, sphtriangulate, surface, triangulate

       2018, P. Wessel, W. H. F. Smith, R. Scharroo, J. Luis, and F. Wobbe