NAME

       filter_seer - post filtering of significant kmers

DESCRIPTION

       Post filtering of significant kmers.

       This program belongs to seer(1) (Sequence Element (kmer) Enrichment Analysis).

OPTIONS

   Required options:
       -k [ --kmers ] arg
              file of output from seer

   Filtering options:
       --chisq arg
              minimum unadjusted p-value to output

       --pval arg
              minimum adjusted p-value to output

       --maf arg
              minimum maf/max 1-maf to output

       --beta arg
              minimum |beta| to output

       --substr
              remove smaller kmers completely represented elsewhere

       --pos_beta
              output positive effect sizes only

   Other options:
       -s [ --sort ] arg
              field to sort on: chisq, pval, maf or beta

       -h [ --help ]
              full help message

AUTHOR

       This manpage was written by Andreas Tille for the Debian distribution and can be used for any other usage
       of the program.

filter_seer 1.1.2                                  March 2017                                     FILTER_SEER(1)