bionic (1) gbf2xml.1.gz

NAME

       gbf2xml - Convert GenBank flatfiles to INSDSeq XML

SYNOPSIS

       gbf2xml [filename]

DESCRIPTION

       gbf2xml  reads  the  specified  GenBank  flatfile (or from standard input when not passed a filename) and
       writes a corresponding INSDSeq XML document to standard output.

BUGS

       Feature intervals that refer to 'far' locations, i.e., those not within the cited record and  which  have
       an accession and colon, are suppressed.  Those rare features (e.g., trans-splicing between molecules) are
       lost.

       Keywords and References are currently not supported.

SEE ALSO

       asn2ff(1), asn2gb(1), xtract(1).