bionic (1) grdblend.1gmt.gz

Provided by: gmt-common_5.4.3+dfsg-1_all bug

NAME

       grdblend - Blend several partially over-lapping grids into one large grid

SYNOPSIS

       grdblend  [  blendfile  |  grid1  grid2  …  ]   -Goutgrid [  -Iincrement ] [  -Rregion ] [  -Cf|l|o|u ] [
       -Nnodata ] [  -Q ] [  -Zscale ] [  -V[level] ] [  -W[z] ] [ -fflags ] [ -nflags ] [ -r ]

       Note: No space is allowed between the option flag and the associated arguments.

DESCRIPTION

       grdblend reads a listing of grid files and blend parameters and creates a binary grid  file  by  blending
       the  other  grids using cosine-taper weights. grdblend will report if some of the nodes are not filled in
       with data. Such unconstrained nodes are set to a value specified by the user [Default is NaN]. Nodes with
       more  than  one  value  will be set to the weighted average value. Any input grid that does not share the
       final output grid’s node registration and grid spacing will  automatically  be  resampled  via  calls  to
       grdsample.  Note:  Due  to the row-by-row i/o nature of operations in grdblend we only support the netCDF
       and native binary grid formats for both input and output.

REQUIRED ARGUMENTS

       -Goutgrid
              outgrid is the name of the binary output grid file. (See GRID FILE FORMATS below). Only netCDF and
              native  binary  grid  formats  are  can  be  written directly. Other output format choices will be
              handled by reformatting the output once blending is complete.

       -Ixinc[unit][+e|n][/yinc[unit][+e|n]]
              x_inc [and  optionally  y_inc]  is  the  grid  spacing.  Optionally,  append  a  suffix  modifier.
              Geographical (degrees) coordinates: Append m to indicate arc minutes or s to indicate arc seconds.
              If one of the units e, f, k, M, n or u is appended instead, the increment is assumed to  be  given
              in  meter, foot, km, Mile, nautical mile or US survey foot, respectively, and will be converted to
              the equivalent degrees longitude at the middle latitude of the region (the conversion  depends  on
              PROJ_ELLIPSOID). If y_inc is given but set to 0 it will be reset equal to x_inc; otherwise it will
              be converted to degrees latitude. All coordinates: If +e is appended then the corresponding max  x
              (east)  or  y  (north) may be slightly adjusted to fit exactly the given increment [by default the
              increment may be adjusted slightly to fit  the  given  domain].  Finally,  instead  of  giving  an
              increment  you  may  specify  the  number of nodes desired by appending +n to the supplied integer
              argument; the increment is then recalculated  from  the  number  of  nodes  and  the  domain.  The
              resulting  increment  value  depends  on  whether  you  have  selected  a  gridline-registered  or
              pixel-registered grid; see App-file-formats for details. Note: if -Rgrdfile is used then the  grid
              spacing has already been initialized; use -I to override the values.

       -Rxmin/xmax/ymin/ymax[+r][+uunit] (more …)
              Specify the region of interest.

OPTIONAL ARGUMENTS

       blendfile
              ASCII  file  with one record per grid file to include in the blend.  Each record may contain up to
              three items, separated by spaces or tabs: the gridfile name (required),  the  -R-setting  for  the
              interior  region  (optional),  and  the  relative  weight wr (optional). In the combined weighting
              scheme, this grid will be given zero weight outside its domain, weight = wr  inside  the  interior
              region,  and a 2-D cosine-tapered weight between those end-members in the boundary strip. However,
              if a negative wr is given then the sense of tapering is inverted (i.e.,  zero  weight  inside  its
              domain). If the inner region should instead exactly match the grid region then specify a - instead
              of the -R-setting, or leave it off entirely.  Likewise, if a weight wr is not specified we default
              to  a  weight  of  1.  If the ASCII blendfile file is not given grdblend will read standard input.
              Alternatively, if you have more than one grid file to blend and you wish (a) all  input  grids  to
              have  the same weight (1) and (b) all grids should use their actual region as the interior region,
              then you may simply list all the grids on the command line instead of providing a  blendfile.  You
              must specify at least 2 input grids for this mechanism to work. Any grid that is not co-registered
              with the desired output layout implied by -R, -I (and -r) will first be resampled  via  grdsample.
              Also,  grids  that  are  not  in  netCDF  or  native  binary  format will first be reformatted via
              grdconvert.

       -C     Clobber mode: Instead of blending, simply pick the value of one of the grids that covers  a  node.
              Select  from  the  following  modes:  f for the first grid to visit a node; o for the last grid to
              visit a node; l for the grid with the lowest value, and u for the grid with the  uppermost  value.
              For  modes  f  and o the ordering of grids in the blendfile will dictate which grid contributes to
              the final result. Weights and cosine tapering are not considered when clobber mode is active.

       -Nnodata
              No data. Set nodes with no input grid to this value [Default is NaN].

       -Q     Create a header-less grid file suitable for use with grdraster.  Requires  that  the  output  grid
              file is a native format (i.e., not netCDF).

       -V[level] (more …)
              Select verbosity level [c].

       -W[z]  Do  not  blend, just output the weights used for each node [Default makes the blend].  Append z to
              write the weight*z sum instead.

       -Zscale
              Scale output values by scale before writing to file. [1].

       -f[i|o]colinfo (more …)
              Specify data types of input and/or output columns.

       -n[b|c|l|n][+a][+bBC][+c][+tthreshold] (more …)
              Select interpolation mode for grids.

       -r (more …)
              Set pixel node registration [gridline].

       -^ or just -
              Print a short message about the syntax of the command, then exits (NOTE: on Windows just use -).

       -+ or just +
              Print an extensive usage (help) message, including the explanation of any  module-specific  option
              (but not the GMT common options), then exits.

       -? or no arguments
              Print a complete usage (help) message, including the explanation of all options, then exits.

GRID FILE FORMATS

       By  default  GMT  writes  out  grid  as single precision floats in a COARDS-complaint netCDF file format.
       However, GMT is able to produce grid files in many  other  commonly  used  grid  file  formats  and  also
       facilitates  so  called  “packing” of grids, writing out floating point data as 1- or 2-byte integers. To
       specify    the    precision,    scale    and    offset,    the    user    should    add    the     suffix
       =ID[+sscale][+ooffset][+ninvalid],  where  ID  is a two-letter identifier of the grid type and precision,
       and scale and offset are optional scale factor and offset to be applied to all grid values,  and  invalid
       is  the  value  used  to  indicate  missing  data. See grdconvert and Section grid-file-format of the GMT
       Technical Reference and Cookbook for more information.

       When writing a netCDF file, the grid is stored by default with the variable name “z”. To specify  another
       variable  name  varname,  append  ?varname to the file name. Note that you may need to escape the special
       meaning of ? in your shell program by putting a backslash in front of it, or by placing the filename  and
       suffix between quotes or double quotes.

GEOGRAPHICAL AND TIME COORDINATES

       When  the  output grid type is netCDF, the coordinates will be labeled “longitude”, “latitude”, or “time”
       based on the attributes of the input data or grid (if any) or on the -f or -R options. For example,  both
       -f0x  -f1t  and  -R90w/90e/0t/3t  will result in a longitude/time grid. When the x, y, or z coordinate is
       time, it will be stored in the grid as relative time since epoch as specified by TIME_UNIT and TIME_EPOCH
       in  the  gmt.conf  file or on the command line. In addition, the unit attribute of the time variable will
       indicate both this unit and epoch.

TAPERING

       While the weights computed are tapered from 1 to 0, we are computing weighted averages, so  if  there  is
       only a single grid given then the weighted output will be identical to the input.  If you are looking for
       a way to taper your data grid, see grdmath’s TAPER operator.

EXAMPLES

       To create a grid file from the four grid files piece_?.nc, giving them each the different  weights,  make
       the blendfile like this

              piece_1.nc -R<subregion_1> 1
              piece_2.nc -R<subregion_2> 1.5
              piece_3.nc -R<subregion_3> 0.9
              piece_4.nc -R<subregion_4> 1

       Then run

              gmt grdblend blend.job -Gblend.nc -R<full_region> -I<dx/dy> -V

       To blend all the grids called MB_*.nc given them all equal weight, try

              gmt grdblend MB_*.nc -Gblend.nc -R<full_region> -I<dx/dy> -V

WARNING ON LARGE FILE SETS

       While  grdblend  can  process  any  number  of files, it works by keeping those files open that are being
       blended, and close files as soon as they are finished.  Depending on your session, many files may  remain
       open  at  the  same time.  Some operating systems set fairly modest default limits on how many concurrent
       files can be open, e.g., 256.  If you run into this problem then you can  change  this  limit;  see  your
       operating system documentation for how to change system limits.

SEE ALSO

       gmt, grd2xyz, grdconvert, grdedit, grdraster, grdsample

       2018, P. Wessel, W. H. F. Smith, R. Scharroo, J. Luis, and F. Wobbe