NAME

       gt-readjoiner-overlap - Compute suffix prefix matches from encoded sequence.

SYNOPSIS

       gt readjoiner overlap [option ...] [file]

DESCRIPTION

       -readset [string]
           specify the readset name (default: undefined)

       -l [value]
           specify the minimum SPM length (default: 0)

       -parts [value]
           specify the number of parts (default: 0)

       -memlimit [string]
           specify maximal amount of memory to be used during index construction (in bytes, the keywords MB and
           GB are allowed) (default: undefined)

       -v [yes|no]
           be verbose (default: no)

       -q [yes|no]
           suppress standard output messages (default: no)

       -help
           display help and exit

       -version
           display version information and exit

REPORTING BUGS

       Report bugs to https://github.com/genometools/genometools/issues.

GenomeTools 1.5.10                                 12/08/2017                              GT-READJOINER-OVER(1)