NAME

       iMath - part of ANTS registration suite

SYNOPSIS

       iMath ImageDimension <OutputImage.ext> [operations and inputs] <Image1.ext> <Image2.ext>

DESCRIPTION

       Usage Information

              ImageDimension:  2 or 3 (for 2 or 3 dimensional operations).  ImageDimension: 4 (for operations on
              4D file, e.g. time-series data).  Operator: See list of valid operators below.

       Mask and Label set operations -----------------------------

       GetLargestComponent
              : Get the single largest labeled object in an image

       Usage  : GetLargestComponent InputImage.ext {MinObjectSize=50}

       Morphological operations ----------------------------- Possible operations are:

              MC = Closing MD = Dilation ME = Erosion MO = Opening

   Possible values for the shape parameter and associated settings are:
              ball   {RadiusIsParmetric=0}    box    cross    annulus    {RadiusIsParametric=0}    {Thickness=1}
              {IncludeCenter=0} polygon {Lines=3}

       Description of Parameters

              RadiusIsParametric:  The  'ball'  and  'annulus' structuring elements have an optional flag called
              'radiusIsParametric' (off by  default).  Setting  this  flag  to  true  will  use  the  parametric
              definition  of  the  object and will generate structuring elements with more accurate areas, which
              can be especially important when morphological operations are intended to remove or retain objects
              of particular sizes. When the mode is turned off (default), the radius is the same, but the object
              diameter is set to (radius*2)+1, which is the size of the neighborhood region. Thus, the  original
              ball  and annulus structuring elements have a systematic bias in the radius of +0.5 voxels in each
              dimension relative to the parametric definition of the radius. Thus,  we  recommend  turning  this
              mode  on  for  more  accurate  structuring  elements,  but  this mode is turned off by default for
              backward compatibility.

              Usage : Operation InputImage.ext {Radius=1}  {ObjectValue=1}  {Shape=1}  {RadiusIsParametric=0  or
              Lines=3} {Thickness=1} {IncludeCenter=0}

iMath 2.2.0                                        August 2017                                          IMATH(1)